pypath.internals.intera

This module provides classes to represent and handle structural details of protein interactions i.e. residues, post-translational modifications, short motifs, domains, domain-motifs and domain-motif interactions, binding interfaces.

members:

Classes

Complex(components[, ncbi_tax_id, name, ...])
Domain(protein[, id_type, ncbi_tax_id, ...])
DomainDomain(domain_a, domain_b[, pdbs, ...])
DomainMotif(domain, ptm[, evidences, pdbs])
Interface(id_a, id_b, source[, id_type, ...])
Motif(protein, start, end[, id_type, ...])
Ptm(protein[, id_type, ncbi_tax_id, typ, ...])
Regulation(ptm, source, target, effect[, ...])
Residue(number, name, protein[, id_type, ...])