pypath.internals.input_formats§

members:

Classes

ArrayMapping(id_type_a, id_type_b[, ncbi_tax_id])

Provides parameters for microarray probe mapping tables.

BiomartMapping(id_type_a[, id_type_b, ...])

FileMapping(id_type_a, id_type_b, input_, ...)

HmdbMapping(id_type_a, id_type_b[, ncbi_tax_id])

MappingInput(type_, id_type_a, id_type_b[, ...])

NetworkInput([name, separator, id_col_a, ...])

PickleMapping(id_type_a, id_type_b, fname[, ...])

ProMapping(id_type_a[, id_type_b, ...])

Provides parameters for mapping table from the Protein Ontology Consortium.

RampMapping(id_type_a, id_type_b[, ncbi_tax_id])

ReadList([name, separator, id_col, id_type, ...])

UnichemMapping(id_type_a, id_type_b[, ...])

UniprotListMapping(id_type_a, id_type_b[, ...])

Provides parameters for downloading mapping table from UniProt Upload Lists webservice.

UniprotMapping(id_type_a[, id_type_b, ...])