pypath.internals.input_formats.HmdbMapping§

class pypath.internals.input_formats.HmdbMapping(id_type_a, id_type_b, ncbi_tax_id=-1)[source]§

Bases: MappingInput

__init__(id_type_a, id_type_b, ncbi_tax_id=-1)[source]§

Paramaters for ID translation tables from the Human Metabolome Database.

Parameters:
  • id_type_a – Custom name for one of the ID types.

  • id_type_b – Custom name for the other ID type.

Methods

__init__(id_type_a, id_type_b[, ncbi_tax_id])

Paramaters for ID translation tables from the Human Metabolome Database.

possible(id_type_a, id_type_b[, ncbi_tax_id])

resource_id_type(id_type[, override])

swap_sides()