pypath.utils.residues.ResidueMapper

class pypath.utils.residues.ResidueMapper

Bases: object

This class stores and serves the PDB –> UniProt residue level mapping. Attempts to download the mapping, and stores it for further use. Converts PDB residue numbers to the corresponding UniProt ones.

__init__()

Methods

__init__()
chains(chains)
clean()	Removes cached mappings, freeing up memory.
get_pdb_chains()
get_residue(ac, resnum[, chains, pdbs])
load_mapping(pdb)
pdb2uniprot(pdb, resnum[, chains])
uniprot2pdb(uniprot, resnum[, chains, pdbs])

clean()

Removes cached mappings, freeing up memory.