pypath.inputs.uniprot.uniprot_taxonomy

pypath.inputs.uniprot.uniprot_taxonomy(ncbi_tax_ids: bool = False) → dict[str, set[str]] | dict[str, int]

From UniProt IDs to organisms

Parameters:

ncbi_tax_ids – Translate the names to NCBI Taxonomy numeric identifiers.

Returns:

A dictionary with SwissProt IDs as keys and sets of various taxon names as values.