pypath.inputs.string.string_physical_interactions

pypath.inputs.string.string_physical_interactions(ncbi_tax_id: int = 9606, score_threshold: int | Literal['highest_confidence', 'high_confidence', 'medium_confidence', 'low_confidence'] = 'highest_confidence') → list[tuple]

Downloads protein physical subnetwork data, including subscores per channel. The interactions indicate that the proteins are part of a physical complex.

Args

score_threshold: Minimum required interaction score. user can use

pre-defined confidence limits or can define a custom value.