pypath.inputs.phosphosite.phosphosite_regsites_one_organism

pypath.inputs.phosphosite.phosphosite_regsites_one_organism(organism=9606)

Returns PhosphoSitePlus regulatory sites translated to one organism by orthology. Residue numbers will be translated where necessary, while gene symbols will be translated to UniProt IDs of the given organism. This works with human, mouse or rat.

Parameters:

organism (int) – NCBI Taxonomy ID of the target organism. In this method possible values are human, mouse or rat, as these species provide the vast majority of the data, and are close enough to each other that the sites can be safely translated between orthologous proteins by sequence alignement.