pypath.inputs.phosphosite.phosphosite_ptm_orthology§
- pypath.inputs.phosphosite.phosphosite_ptm_orthology()[source]§
Returns an orthology translation dict of phosphosites based on phosphorylation sites table from PhosphoSitePlus. In the result all PTMs represented by a tuple of the following 6 elements: UniProt ID, isoform (int), residue one letter code, residue number (int), NCBI Taxonomy ID (int), modification type.
- Parameters:
source (int) – Source taxon (NCBI Taxonomy).
target (int) – Target taxon (NCBI Taxonomy).