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pypath.inputs.matrixdb§

members:

Functions

matrixdb_annotations([organism])

matrixdb_ecm_proteins([organism])

Returns a set of ECM (extracellular matrix) protein UniProt IDs retrieved from MatrixDB.

matrixdb_interactions([organism])

matrixdb_membrane_proteins([organism])

Returns a set of membrane protein UniProt IDs retrieved from MatrixDB.

matrixdb_secreted_proteins([organism])

Returns a set of secreted protein UniProt IDs retrieved from MatrixDB.

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© Copyright 2024, Denes Turei <turei.denes@gmail.com>, Nicolàs Palacio, Sebastian Lobentanzer, Olga Ivanova, Melih Darcan, Erva Ulusoy, Tennur Kilic, Omer Kaan Vural, Ahmet Rifaioglu, Charles Tapley Hoyt.

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