pypath.inputs.biomart.biomart_microarray§
- pypath.inputs.biomart.biomart_microarray(array_type: str, gene: bool = True, transcript: bool = False, peptide: bool = False, organism: int | str = 9606)[source]§
Microarray probe identifier mappings.
- Args
- array_type:
The microarray model, as shown on the BioMart webpage, or the corresponding code. For a full list of available identifiers see the
biomart_microarray_types.- gene:
Include the mapping to Ensembl gene IDs.
- transcript:
Include the mapping to Ensembl transcript IDs.
- peptide:
Include the mapping to Ensembl peptide IDs.
- organism:
Name or ID of an organism.
- Returns
A dictionary with Ensembl gene, transcript and peptide IDs as keys and sets of microarray probe IDs as values.