pypath.inputs.biomart.biomart_homology§

pypath.inputs.biomart.biomart_homology(source_organism: int | str = 9606, target_organism: int | str = 10090, extra_fields: str | Iterable[str] = 'external_gene_name')[source]§

Retrieves orthology data from Ensembl Biomart.

Returns

List of named tuples filtered to genes of the source organism having orthologues in the target organism, with homology related fields.