pypath§

pypath is a Python module building molecular biology databases. With pypath you can access, process and combine more than 170 public resources, build molecular interaction networks, include annotations about the function, localization, structure and other properties of genes and proteins. pypath also provides a number of utilities for ID translation, orthology translation, handling of taxonomy and sequences, serving the combined databases by a web server, etc.

members:

Functions

disclaimer()

Prints a disclaimer about copyrights of database data.

info([loglevel])

Prints basic information about the current session.

log()

Browse the current pypath logfile.

Modules

pypath.core

pypath.data

Data included in the module:

pypath.inputs

pypath.internals

pypath.legacy

pypath.omnipath

pypath.resources

pypath.share

pypath.utils

pypath.visual