pypath.visual.drawing.Plot§

class pypath.visual.drawing.Plot(graph=None, filename=None, graphix_dir='pdf', graphix_format='pdf', name=None, title_text=None, title_font_family=None, title_font_size=None, title_color='#646567', size=None, layout='fruchterman_reingold', layout_param=None, vertex_label=None, vertex_size=None, vertex_label_size='degree_label_size', edge_width=None, vertex_color='#6EA945', vertex_label_color='#007B7F', vertex_alpha='AA', vertex_frame_color='#FFFFFF00', vertex_frame_width=0, edge_label=None, edge_label_size=None, edge_label_color='#007B7F', edge_curved=None, edge_color='#818284', edge_alpha='AA', autocurve=None, vertex_label_font='sans-serif', edge_label_font='sans-serif', edge_arrow_size=1.0, edge_arrow_width=1.0, palettes={}, bbox=None, margin=10, small=None, dimensions=(1280, 1280), grouping=None, **kwargs)[source]§

Bases: Logger

__init__(graph=None, filename=None, graphix_dir='pdf', graphix_format='pdf', name=None, title_text=None, title_font_family=None, title_font_size=None, title_color='#646567', size=None, layout='fruchterman_reingold', layout_param=None, vertex_label=None, vertex_size=None, vertex_label_size='degree_label_size', edge_width=None, vertex_color='#6EA945', vertex_label_color='#007B7F', vertex_alpha='AA', vertex_frame_color='#FFFFFF00', vertex_frame_width=0, edge_label=None, edge_label_size=None, edge_label_color='#007B7F', edge_curved=None, edge_color='#818284', edge_alpha='AA', autocurve=None, vertex_label_font='sans-serif', edge_label_font='sans-serif', edge_arrow_size=1.0, edge_arrow_width=1.0, palettes={}, bbox=None, margin=10, small=None, dimensions=(1280, 1280), grouping=None, **kwargs)[source]§

Make this instance a logger.

Parameters:
  • name – The label of this instance that will be prepended to all messages it sends to the logger.

  • module – Send the messages by the logger of this module.

Methods

__init__([graph, filename, graphix_dir, ...])

Make this instance a logger.

colorize([what, coldef, alpha, attr, palette])

draw([return_data])

hex2rgb(rgbhex)

large_defaults()

layout_update_needed(layout, param)

make_title()

medium_defaults()

reload()

rgb1(rgb256)

set_alpha(seq, alpha, attr)

set_defaults(preset)

set_param(param, value)

small_defaults()

title(title[, family, size, color])

update_filename()

update_graph(graph[, title])

update_layout([layout, param])

update_page([size, margin])