pypath.omnipath.server.run.TableServer

class pypath.omnipath.server.run.TableServer(input_files=None, only_tables=None, exclude_tables=None)

Bases: BaseServer

__init__(input_files=None, only_tables=None, exclude_tables=None)

Server based on pandas data frames.

Parameters:

input_files (dict) – Paths to tables exported by the pypath.websrvtab module.

Methods

__init__([input_files, only_tables, ...])	Server based on pandas data frames.
about(req)
annotations(req)
annotations_summary(req)
complexes(req)
databases(req)
datasets(req)
enz_sub(req)
enzsub(req[, organisms, enzyme_substrate])
info(req)
interactions(req[, datasets, databases, ...])
intercell(req)
intercell_summary(req)
ptms(req)
queries(req)
render_GET(request)
render_POST(request)
resources(req)

Attributes

args_reference
cytoscape_attributes
data_query_types
dataset2type
datasets_
default_dtypes
default_input_files
dorothea_methods
enzsub_fields
field_synonyms
int_list_fields
interaction_fields
list_fields
query_type_synonyms
query_types
recomment