pypath.omnipath.server.build.WebserviceTables

class pypath.omnipath.server.build.WebserviceTables(only_human=False, build_dir='.', outfile_interactions='omnipath_webservice_interactions.tsv', outfile_enz_sub='omnipath_webservice_enz_sub.tsv', outfile_complexes='omnipath_webservice_complexes.tsv', outfile_annotations='omnipath_webservice_annotations.tsv', outfile_intercell='omnipath_webservice_intercell.tsv', network_datasets=None)

Bases: Logger

Creates the data frames which the web service uses to serve the data from.

__init__(only_human=False, build_dir='.', outfile_interactions='omnipath_webservice_interactions.tsv', outfile_enz_sub='omnipath_webservice_enz_sub.tsv', outfile_complexes='omnipath_webservice_complexes.tsv', outfile_annotations='omnipath_webservice_annotations.tsv', outfile_intercell='omnipath_webservice_intercell.tsv', network_datasets=None)

Make this instance a logger.

Parameters:

• name – The label of this instance that will be prepended to all messages it sends to the logger.

• module – Send the messages by the logger of this module.

Methods

__init__([only_human, build_dir, ...])	Make this instance a logger.
annotations()
complexes()
enz_sub()
interactions()
interactions_legacy()
intercell()
main()
reload()