pypath.internals.refs.get_pubmed_data§

pypath.internals.refs.get_pubmed_data(pp, cachefile=None, htp_threshold=20)[source]§

For one PyPath object, obtains metadata for all PubMed IDs through NCBI E-utils.

Parameters:
  • pppypath.PyPath object

  • htp_threshold – The number of interactions for one reference above the study considered to be high-throughput.