pypath.inputs.threedcomplex.threedcomplex_contacts

pypath.inputs.threedcomplex.threedcomplex_contacts(chains=None, pdb_uniprot=None)

Returns the 3D structure based domain-domain contact map from the 3D Complex database.

Args

chains (dict): A dict of chain correspondancy map, as created by

threedcomplex_chains. If None, it will be obtained automatically.

pdb_uniprot (dict): A dict of PDB-UniProt mappings, as created by

pypath.inputs.pdb.pdb_chains. If None, it will be obtained automatically.