pypath.inputs.cellinker.cellinker_smol_interactions

pypath.inputs.cellinker.cellinker_smol_interactions(organism=9606)

Small molecule ligand-protein receptor interactions from the Cellinker database (http://www.rna-society.org/cellinker/).

Args

organism (int,str): Name or identifier of the organism. Only mouse

and human are available.

Returns

(set): A set of tuples, each representing a preprocessed Cellinker

interaction. The proteins are represented by their UniProt IDs, the small molecules by PubChem CIDs, while the protein complexes by Complex objects.