pypath.inputs.cellinker.cellinker_annotations

pypath.inputs.cellinker.cellinker_annotations(organism=9606, entity_type=None)

Ligand and receptor annotations from the Cellinker database (http://www.rna-society.org/cellinker/).

Args

organism (int,str): Name or identifier of the organism. Only mouse

and human are available.

entity_type (str): Either protein or complex. If None, both

proteins and protein complexes will be included.

Returns

(dict): A dict of sets of tuples, keys are UniProt IDs for proteins

and Complex objects for protein complexes. The tuples are annotations with ligand or receptor role, localization and type.