pypath.inputs.cellchatdb.cellchatdb_interactions

pypath.inputs.cellchatdb.cellchatdb_interactions(organism=9606, ligand_receptor=True, cofactors=True)

Retrieves data from CellChatDB and processes interactions.

Parameters:

• organism (int,str) – Human and mouse are available, for incomprehensive values falls back to human.

• ligand_receptor (bool) – Include ligand-receptor interactions.

• cofactors (bool) – Include interactions between cofactors (agonists, antagonists), coreceptors and receptors.

Returns:

Interactions as list of named tuples.