pypath.inputs.cellcall.cellcall_download_all

pypath.inputs.cellcall.cellcall_download_all(extended=True, human=True, mouse=True)

Downloads ligand-receptor-TF pathway data from CellCall (ShellyCoder/cellcall). CellCall has core (high confidence) and extended datasets, human and homology inferred mouse datasets, 4 datasets in total. By default all these are downloaded here, with the parameters you can exclude the extended part and select the organism. The pathway identifiers refer to KEGG pathways.

Args

extended (bool): Use also the extended datasets. human (bool): Include human interactions. mouse (bool): Include mouse interactions.

Returns

A list of dicts, each is a record as it provided by the CellCall database.