pypath.inputs.cellinker§

members:

Functions

cellinker_annotations([organism, entity_type])

Ligand and receptor annotations from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_complex_annotations([organism])

Ligand and receptor annotations from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_complexes([organism])

Protein complex information from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_complexes_raw([organism])

Downloads protein complex data from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_lr_interactions([organism])

Ligand-receptor interactions from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_lr_interactions_raw([organism])

Ligand-receptor interactions from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_protein_annotations([organism])

Ligand and receptor annotations from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_smol_interactions([organism])

Small molecule ligand-protein receptor interactions from the Cellinker database (http://www.rna-society.org/cellinker/).

cellinker_smol_interactions_raw([organism])

Small molecule ligand-protein receptor interactions from the Cellinker database (http://www.rna-society.org/cellinker/).

components_to_complex(components[, organism])

Converts a set of components to pypath.internals.intera.Complex objects.

Classes

CellinkerInteraction(ligand, receptor, ...)