pypath.core.complex§

members:

Functions

all_complexes()

Returns a set of all complexes in the database which serves as a reference set for many methods, just like inputs.uniprot_db.all_uniprots represents the proteome.

get_db(**kwargs)

Retrieves the current database instance and initializes it if does not exist yet.

init_db(**kwargs)

Initializes or reloads the complex database.

Classes

AbstractComplexResource(name[, ncbi_tax_id, ...])

A resource which provides information about molecular complexes.

CellPhoneDB(**kwargs)

Cellchatdb([input_args])

Cellinker([input_args])

Compleat([input_args])

ComplexAggregator([resources, pickle_file])

ComplexPortal([input_args])

Corum([input_args])

GuideToPharmacology([input_args])

Havugimana([input_args])

Hpmr([input_args])

Humap([input_args])

Humap2([input_args])

Icellnet([input_args])

Kegg([input_args])

Pdb([input_args])

Signor([input_args])

Spike([input_args])